BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039F06LP1|AL430732
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1698 1871 0.0
>3x_Contig1698
Length = 21001
Score = 1871 bits (944), Expect = 0.0
Identities = 961/964 (99%), Gaps = 2/964 (0%)
Strand = Plus / Plus
Query: 1 gatctcttgaagatttgagctttttaacgctagcaatggtatcatcaatctctttcataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 gatctcttgaagatttgagctttttaacgctagcaatggtatcatcaatctctttcataa 5158
Query: 61 tgtcttttaaaatcatgcccgagtctccctttttagacaatacgtcaagggaatgtgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 tgtcttttaaaatcatgcccgagtctccctttttagacaatacgtcaagggaatgtgaca 5218
Query: 121 aaacttgtggtagtagccgagatggatgaccaattcttaataattcatcacctggaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 aaacttgtggtagtagccgagatggatgaccaattcttaataattcatcacctggaacaa 5278
Query: 181 ctttactaagtcgttccaagattgtatcaacggaaatatttgatggtccacaaaccaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5279 ctttactaagtcgttccaagattgtatcaacggaaatatttgatggtccacaaaccaaaa 5338
Query: 241 tcctttcccctctatcgtataactgttttatcaactctacaagggtatatgtctttccc- 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 tcctttcccctctatcgtataactgttttatcaactctacaagggtatatgtctttcccc 5398
Query: 300 gtccctggcgggccatggataatagatatttcatttgacaacgaatgttggatggcatca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5399 gtccctggcgggccatggataatagatatttcatttgacaacgaatgttggatggcatca 5458
Query: 360 cgttgagattcattgagttgttcgttgtagaacttcacgttatgttcagggtctttttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5459 cgttgagattcattgagttgttcgttgtagaacttcacgttatgttcagggtctttttta 5518
Query: 420 atgaactttctttcgtgcaacatgtattggatcaagatattgtcgggtattgaattgaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5519 atgaactttctttcgtgcaacatgtattggatcaagatattgtcgggtattgaattgaac 5578
Query: 480 tctgccaacttcctcatagtagattgcattctcttataagtaatggtattagtagtcttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5579 tctgccaacttcctcatagtagattgcattctcttataagtaatggtattagtagtcttc 5638
Query: 540 aagagacacaacctgttgaacgagtataattgtacggcatcttggtctttagattcatcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5639 aagagacacaacctgttgaacgagtataattgtacggcatcttggtctttagattcatcc 5698
Query: 600 acagccaatacgatttggttgttggacactttggataccacggcatccaagtttaccgtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5699 acagccaatacgatttggttgttggacactttggataccacggcatccaagtttaccgtt 5758
Query: 660 tcatccttcttactctttgcctttgccgaagtttgaaccaatactatatcaccgacttta 719
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5759 tcatccttcttactctttgcctttgccgaaggttgaaccaatactatatcaccgacttta 5818
Query: 720 aaggaaccagtgttcaattccttggtgatggctggatctgcagaaagttccaagtatagt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5819 aaggaaccagtgttcaattccttggtgatggctggatctgcagaaagttccaagtatagt 5878
Query: 780 ttcgaaccgatcccagttctaatgttatctaactgtagatggttaattgccaacccagct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5879 ttcgaaccgatcccagttctaatgttatctaactgtagatggttaattgccaacccagct 5938
Query: 840 gcgatcaatttgggaagtggggcactagctagcaattttgacgtttgttctacatcttgt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5939 gcgatcaatttgggaagtggggcactagctagcaattttgacgtttgttctacatcttgt 5998
Query: 900 tgctgctcatgggaaattccgtcaagg-acttttcagcgacctgtttattcacagagcag 958
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5999 tgctgctcatgggaaattccgtcaaggaacttttcagcgacctgtttattcacagagcag 6058
Query: 959 tcac 962
||||
Sbjct: 6059 tcac 6062
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7072
Number of Sequences: 1807
Number of extensions: 7072
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)